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A subset of data to illustrate how to perform an analysis of OTU with phyloseq, vegan and microbiome.

Usage

phyloseq_template_toy_data

Format

phyloseq_template_toy_data

A list containing 3 DataFrames:

meta

Metadata table with 29 samples and 4 features (layer, age, pH and depth).

otu

OTU table with 29 samples and 3,728 taxa groups.

taxa

Taxonomic table with 7 ranks and 3,728 taxa groups.

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